PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023549385.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB
Protein Properties Length: 312aa    MW: 35786 Da    PI: 5.9283
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023549385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.96.5e-151764148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEde+l ++    G g+W+ Iar  g+ R++k+c++rw +yl
   XP_023549385.1 17 KGLWSPEEDEKLMRYMLSNGQGCWTDIARNAGLLRCGKSCRLRWINYL 64
                     678*****************************99************97 PP
2Myb_DNA-binding44.73e-1470113146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++++E+ l+++++ +lG++ W+ Ia++++ gRt++++k+ w++
   XP_023549385.1  70 RGAFSPQEERLILHLHSLLGNR-WSQIAARLP-GRTDNEIKNLWNS 113
                      89********************.*********.*********9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MRKPDSAAAA ANIRLKKGLW SPEEDEKLMR YMLSNGQGCW TDIARNAGLL RCGKSCRLRW  60
INYLRPDLKR GAFSPQEERL ILHLHSLLGN RWSQIAARLP GRTDNEIKNL WNSSLKKRLK  120
NHSNISSPNP SESSELRSSN SFGELTENII PTHEHNNIMN MFMESSSFSS STSKSTPSLF  180
LQNYIPCDPF PTLLDNHQYN RVGGAMEEGY YGDYSRTIFE PRGLVRDNYD FSHLPPLGNG  240
DIIEEIKVPS INIKENNENN IQEFNNDYFD YNNQMNFKAE GIFGNNYQAE LQDNLKIGGW  300
DLDGFILDFQ MD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08500.14e-69MYB family protein