PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023549396.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 163aa    MW: 17603.8 Da    PI: 9.8629
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023549396.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.000193759123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C ++F ++  L  H++ H
  XP_023549396.1 37 FRCQFCRRVFANSQALGGHQNAH 59
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MSILKLFGFP LVEHDGVQPE TPEGGGGDIN SDDDRKFRCQ FCRRVFANSQ ALGGHQNAHK  60
RERQRAKRAL YFHALRPPPL YTNIGSSGGS RILPPSRNGY FTAAYGGVSA SSGRWMFGKM  120
ESSGCKLDGE KGLPNHNCAM NSSAFASIIS SPPSMVFSSL SSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58070.11e-13C2H2 family protein