PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023549470.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 630aa MW: 71322.4 Da PI: 4.5697

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023549470.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.2	1.2e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v XP_023549470.1 6 LPPGFRFHPTDEELVAYYLKRKINGREIEL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVN 99 79**************************.99***********6434555777*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s ++++vg+kktLv+y+grap+g +tdWvmheyrl XP_023549470.1 100 S-QSRAVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 630 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING REIELEIIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QSRAVGMKKT LVYYRGRAPH 120 GARTDWVMHE YRLDDRECDV PSSGLQDAYA LCRVFKKSAT IAPKIEENQQ YCNITSSSNQ 180 FINSDQSSEL YSEGRCEEPE SSNYSMPFDG FQSHQVNKDC SFDMFGGRRE GKWSQFLSQE 240 AFNSAPSFPS YANIPYPPSK VDIALECARL QHRFTLPPLE AEGFPNSSYS DHFKMPQPVE 300 PTMLGGSSET STDILQEILS VAQASQELAN QSSVVETTTW DGGLANVYGC SNEDFNFMGN 360 KDGFHDWNSS TRFHVESSWD DPFSKCIEVG NVGDEIPVEN LRWVGMSNKD LDKNCMEESK 420 LVPIENISSF PIEEQVNGQM NDFSLTFINE DDSNANNFVM EGSGNSIVNY SSSPSFEVVE 480 EIKVNHGLFI STRQVAETFF HQTMPSETVK VQTLTSFMAP NFISFHERTP QKTASFFNGS 540 SLKKPWKSLQ RKIVSILEIL MIFVSVFSEE EEEDDDDDDN NNGEGEKLLS EEEELRSKGK 600 GEGLNMILKK TAIFFSIASL ALCSIWANYN

Sequence ? help Back to Top

Protein Sequence Length: 630 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING REIELEIIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QSRAVGMKKT LVYYRGRAPH  120
GARTDWVMHE YRLDDRECDV PSSGLQDAYA LCRVFKKSAT IAPKIEENQQ YCNITSSSNQ  180
FINSDQSSEL YSEGRCEEPE SSNYSMPFDG FQSHQVNKDC SFDMFGGRRE GKWSQFLSQE  240
AFNSAPSFPS YANIPYPPSK VDIALECARL QHRFTLPPLE AEGFPNSSYS DHFKMPQPVE  300
PTMLGGSSET STDILQEILS VAQASQELAN QSSVVETTTW DGGLANVYGC SNEDFNFMGN  360
KDGFHDWNSS TRFHVESSWD DPFSKCIEVG NVGDEIPVEN LRWVGMSNKD LDKNCMEESK  420
LVPIENISSF PIEEQVNGQM NDFSLTFINE DDSNANNFVM EGSGNSIVNY SSSPSFEVVE  480
EIKVNHGLFI STRQVAETFF HQTMPSETVK VQTLTSFMAP NFISFHERTP QKTASFFNGS  540
SLKKPWKSLQ RKIVSILEIL MIFVSVFSEE EEEDDDDDDN NNGEGEKLLS EEEELRSKGK  600
GEGLNMILKK TAIFFSIASL ALCSIWANYN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-159	NAC family protein