PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023549507.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WOX

Protein Properties

Length: 220aa MW: 24962.8 Da PI: 9.1027

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023549507.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.6	6.6e-21	40	101	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ R+++t+eq+++L elF++ r+ps +++++++++l +++ ++V++WFqN++a+e++ XP_023549507.1 40 KCGRWNPTAEQVKVLTELFRSgLRTPSSDQIQKISHQLsfygKIESKNVFYWFQNHKARERQ 101 568***************99************************************97 PP
2	Wus_type_Homeobox	113.8	8.8e-37	40	103	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++ RW+Pt+eQ+k+L+el++sGlrtP++++iq+i+++L+ yGkie+kNVfyWFQN+kaRerqk+ XP_023549507.1 40 KCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKR 103 578***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MSRKSINMED GVCSRIYVKG GGCGGEGGGG GGGKGSGSSK CGRWNPTAEQ VKVLTELFRS 60 GLRTPSSDQI QKISHQLSFY GKIESKNVFY WFQNHKARER QKRRKVSLSL DHSHQQQHFL 120 HPLHLSNDHN NNNNNNNIIP PTNHFADQSS TNKGIMELEP ERMMKTLQLF PLNSIDETQG 180 SDDYHQFRVD GKHYEDATSF TYKIETKMDH PPLDLRLSFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	3e-47	WOX family protein