PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023549719.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 318aa    MW: 35409.4 Da    PI: 4.3715
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023549719.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-19124174155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GVr++k +g+W+AeIrdps+    +r++lg++ taeeA +a++  r+++e+
  XP_023549719.1 124 SQYRGVRQRK-WGKWAAEIRDPSK---GARIWLGTYNTAEEASQAYESKRLEFEN 174
                     78*******9.**********965...4************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MPEPRVLQLT NQKSFGKKSK SRPEEPKMTR KIRVICNDPD ATDSSSSEDE GEIGTKSLKL  60
KRIVREIHLP LFPFQSSKSM DVTTSTQSSS QDSNNGSKNP ELKRKRGLGS KTMPKTLSTR  120
RSASQYRGVR QRKWGKWAAE IRDPSKGARI WLGTYNTAEE ASQAYESKRL EFENAMAAAP  180
KANVIISSSS SSSDENEEES GTAISQTSPP AIVEMETSSS VLIKEEEVID TSLMNELQIP  240
NLGFVDEDFE INLGLPELDP FFMNDIGLLF DDFSGMDDLQ IYGFDEDEPS CLPDCDFNDF  300
GNDEISCWVD EALNVPCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.13e-34ERF family protein