PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023549828.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 224aa    MW: 24859.4 Da    PI: 9.1758
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023549828.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.2e-2078128255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+++g  +r++lg+++ta eAaka+++a+ k++g
  XP_023549828.1  78 HYRGVRRRP-WGKFAAEIRDPNKRG--ARVWLGTYDTAIEAAKAYDRAAFKMRG 128
                     7********.**********96655..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MASMDDASTL DLISQHLLND FNSIEAFTSS LNFNNNGVKP QISAAPLKVS PRRPSLNVAI  60
PPKIYSVEPK SDVGMSRHYR GVRRRPWGKF AAEIRDPNKR GARVWLGTYD TAIEAAKAYD  120
RAAFKMRGSK AILNFPLEAG KEVEEPPLKA EVGRKRRREN EAVELGNKTV KKEESPETTE  180
KEIPASVCPL TPSCWATVWD CDMNGIFSVP PLSPLMGYPQ CTVI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154158RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.11e-61ERF family protein