PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023549836.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 199aa MW: 22031.7 Da PI: 10.8252

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023549836.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.3	2.6e-31	132	186	2	56
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 pr+rWt LH++Fv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ++R + XP_023549836.1 132 PRMRWTRSLHAQFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMFRAH 186 9****************************************************86 PP
2	Myb_DNA-binding	45.5	1.8e-14	133	184	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+++ XP_023549836.1 133 RMRWTRSLHAQFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMFR 184 89***********************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MPNTQSTSSS SSSSSSFLDL SLQISPPINS TFPTSIETSN GVLGAHKFNQ ITNWVWLLDH 60 HLPPSEDHHG LFNQIHGFPI HPNNPSSFSW KHSKQMPSPS SSISYSNISS FRYQLNAGRS 120 STGARGRGVR APRMRWTRSL HAQFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL 180 QMFRAHKTTH KPPASPLGE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	1e-33	G2-like family protein