PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023550210.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 312aa    MW: 34418.1 Da    PI: 4.5127
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023550210.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-19112162155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  XP_023550210.1 112 KKFRGVRQRP-WGKWAAEIRDPL----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 162
                     59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MGFDSVFGRP IKYTEHLNLV KLTSVPETRQ RVVRISVSDG DATDSSSDDE PEMFGRQRVK  60
KFVNEITIEP SCSGEGNGIW GGNRSERIGL RRSPGKCGVS RNRRSVKPPI GKKFRGVRQR  120
PWGKWAAEIR DPLRRVRLWL GTYDTAEEAA MVYDNAAIQL RGPDALTNFT TQPPKSSAGY  180
NSGEESNNNI SSPTSVLRCP SPAIEEIHPQ IPGEPDNSCM SENLSSEFSS CSDTFIPDDI  240
FTFETTIPTL FDELGDGSFN DFFSDGGSFN GVFHSPVEEI GSGLVLEYPT PPPDDFFQDF  300
SDVFGSDPLV VL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-44ERF family protein