PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023550257.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 536aa MW: 60083 Da PI: 4.5046

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023550257.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.7	1.6e-51	9	136	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 l+pGfrFhPtdee+v +yL++kv+gk++++ + i+ ++iyk+ePwdLp k k+k+++ ewyfFs+ dkky +++r+nrat++gyWk+tgkd++v XP_023550257.1 9 LAPGFRFHPTDEEIVGYYLRRKVSGKPIRF-DPISVTEIYKSEPWDLPgKsKLKSRDLEWYFFSPLDKKYGNSSRTNRATEKGYWKTTGKDRPVR 102 579************************9.89***********6347777888*********************************** PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++++vg+kktLv+++grap+g +++Wvmheyrl XP_023550257.1 103 C-NSRVVGMKKTLVYHSGRAPRGARSNWVMHEYRL 136 .999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MGRDSTTSLA PGFRFHPTDE EIVGYYLRRK VSGKPIRFDP ISVTEIYKSE PWDLPGKSKL 60 KSRDLEWYFF SPLDKKYGNS SRTNRATEKG YWKTTGKDRP VRCNSRVVGM KKTLVYHSGR 120 APRGARSNWV MHEYRLTDEG LEKAGVVQDA FVLCRVFQKS GPGPKNGEQY GAPFVEEEWE 180 EDEELTLPGE EIVANKGLVD DSEALHLEVD DIAQYFDGEL PCECTQLPSN CPQDASNHVM 240 LPNVLVENDN KPETCAIETV ELQQSHKFFQ PEQYQMGANS EKDEDIDYLL NEPYPSVPDD 300 LALNEELFLE ANDLSNPAES DPTGFDLLEE YLTFFDADDN LHLDFEPSDI LGSEEPISGQ 360 AIPEEVEKEF MATKQASVAS VNDASTSKPN LEAIETDSKS PFLKRASYML GNIPAPPAFA 420 SEYPSKDMAI RLNSSAHTSS PAHVTAQMIR VRNSTPSGNL SSSLYGKNAD VELILSFARH 480 RHQGESDDIV TQLPIFGAQS QKNGNMGSRA FLFFFLLFWV LILSVSFKVG SYIYTH

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MGRDSTTSLA PGFRFHPTDE EIVGYYLRRK VSGKPIRFDP ISVTEIYKSE PWDLPGKSKL  60
KSRDLEWYFF SPLDKKYGNS SRTNRATEKG YWKTTGKDRP VRCNSRVVGM KKTLVYHSGR  120
APRGARSNWV MHEYRLTDEG LEKAGVVQDA FVLCRVFQKS GPGPKNGEQY GAPFVEEEWE  180
EDEELTLPGE EIVANKGLVD DSEALHLEVD DIAQYFDGEL PCECTQLPSN CPQDASNHVM  240
LPNVLVENDN KPETCAIETV ELQQSHKFFQ PEQYQMGANS EKDEDIDYLL NEPYPSVPDD  300
LALNEELFLE ANDLSNPAES DPTGFDLLEE YLTFFDADDN LHLDFEPSDI LGSEEPISGQ  360
AIPEEVEKEF MATKQASVAS VNDASTSKPN LEAIETDSKS PFLKRASYML GNIPAPPAFA  420
SEYPSKDMAI RLNSSAHTSS PAHVTAQMIR VRNSTPSGNL SSSLYGKNAD VELILSFARH  480
RHQGESDDIV TQLPIFGAQS QKNGNMGSRA FLFFFLLFWV LILSVSFKVG SYIYTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	1e-101	NAC family protein