PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023550374.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 199aa    MW: 22061.8 Da    PI: 6.7798
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023550374.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.53.1e-10117160755
                     HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ ++RR+ri +++  L+el+P+       K++ +++LekA+ Y+k Lq
  XP_023550374.1 117 IAAKNRRERISERLKILQELVPNG-----SKVDLVTMLEKAISYVKFLQ 160
                     5679*******************5.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MALANSAEQE QQISDSLINF KCGIGNNEPL LSFEPQGVCQ LDTHNWDQLR AMEDPSPPRH  60
HGDHSPLYGC LSYAIQDPEA AQDITGNHKR AHTTGNSSEG VCKKQCKSST AKDPQSIAAK  120
NRRERISERL KILQELVPNG SKVDLVTMLE KAISYVKFLQ RVKILAADEF WPVQGGKAPD  180
ISQVREAIDA ILSSQRERS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.14e-50bHLH family protein