PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023550597.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 263aa    MW: 28809.4 Da    PI: 7.3467
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023550597.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.97.1e-2082131255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrd      +r r +lg+++taeeAa a++ a+ kl+g
  XP_023550597.1  82 KFRGVRRRP-WGKWAAEIRD----SdRRVRMWLGTYDTAEEAAIAYDSAAVKLRG 131
                     89*******.**********....3346*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MEAPTILRKP GNFAGRTNVG SRIVRISMTD PDATDSSSSD EDAVNFTRRR VKRYVGEITI  60
GTAAGEGGRK KKKKKKTGNV RKFRGVRRRP WGKWAAEIRD SDRRVRMWLG TYDTAEEAAI  120
AYDSAAVKLR GPTALTNFPT PPPPPPFSCD DPSSPTNLSS PTSVLHYRTH LAECLPSDRA  180
TVNGGGADVS PVVDFLFSDD IFKSIILEPP FFLEYQTSPI PETPWAGGGG WGETVGAAEC  240
NKKVEEDDYF EEILMGSDPL VVL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16975RKKKKKK
27076RKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53290.17e-22ERF family protein