PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023550657.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 174aa    MW: 19248.8 Da    PI: 7.5964
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023550657.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2544e-172069154
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                    s+ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a+ aa ++l+
  XP_023550657.1 20 SKYKGVRMRS-WGSWVSEIRPP---NQKARIWLGSYPTAEAAARAYNAALLCLK 69
                    89*****998.**********9...336*********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MVKKELGKDH HQPTASASKS KYKGVRMRSW GSWVSEIRPP NQKARIWLGS YPTAEAAARA  60
YNAALLCLKD SAATLMSPKS IKRVAAEAAA NAASFDGYVE NKVGSIDVPL SPRSSSSSSV  120
PSTSNNDSIM TMEPLWFNFD DIVTPKYIEH MMDGTLFDPP IVDEENDIRL WSFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.12e-20ERF family protein