PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023550767.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 197aa    MW: 22066.9 Da    PI: 7.6729
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023550767.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.41.5e-17105155255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+++AeIrdp   + k  r++lg++++  +Aaka++ a+ +l+g
  XP_023550767.1 105 HFRGVRRRP-WGKFAAEIRDP---NrKGSRVWLGTYDSDVDAAKAYDCAAFRLRG 155
                     79*******.**********9...6566**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MASLEEFFNI EFITQFLLGD SLDHQTHFET DSSFLHPIKL EDFFFDSQIT PPLPPPVPAE  60
GSDNETKSSE VVHPSLPKPD MSGQVCHVKA EDAVAGTTGE KVKKHFRGVR RRPWGKFAAE  120
IRDPNRKGSR VWLGTYDSDV DAAKAYDCAA FRLRGRKAIL NFPLEAGEPD PPAVANSKRG  180
RQKWTNVRKG LMAMNEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.12e-39ERF family protein