PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023550779.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 199aa    MW: 22248.4 Da    PI: 9.5903
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023550779.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH201.2e-061051441155
                     HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     rR +r+ +++  L++l+ +      +K + a++L++A+ YIk  q
  XP_023550779.1 105 RRSQRLSDKITALQKLVSPY-----GKTDTASVLQEACLYIKFVQ 144
                     7889**************99.....9****************877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MDVPSQVVNN YGFCLESKLF NNDGQLKGEG FTIPCQHPLT YQPGCNASKS MTENVSPQSV  60
LFTKKISFLQ NESHAKKREF FAQKGVQAAP YDLAGDNKRM KEPARRSQRL SDKITALQKL  120
VSPYGKTDTA SVLQEACLYI KFVQEHIQNL LQMQSSSYKN LNPQGTQQKQ GNLRSEGLCV  180
VPVTFTQKIA LNKDINLVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31730.13e-21bHLH family protein