PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023550975.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 160aa    MW: 18327.3 Da    PI: 9.5266
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023550975.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.95.2e-1879129255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdps   k  r++lg+f++  +Aa+a++ a+ kl+g
  XP_023550975.1  79 RYRGVRRRP-WGKFAAEIRDPSR--KGSRVWLGTFDSDVDAARAYDSAAFKLRG 129
                     7********.**********854..34**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MELLQDSDSF FNLLEFEFHS PPPALFSLPP IKFEFEDFEY MKPSEEEESP IQDSRSHQER  60
QSTRSSSPEA GLRSDGGRRY RGVRRRPWGK FAAEIRDPSR KGSRVWLGTF DSDVDAARAY  120
DSAAFKLRGR KAKLNFPLDA GNSDPPPSNG RKKRRETTVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.12e-32ERF family protein