PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023551229.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 537aa MW: 60830.5 Da PI: 6.4105

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023551229.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	182.7	9.1e-57	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeelv +yLk+k++g+++el evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk+gyWkatgkd++v XP_023551229.1 6 LPPGFRFHPTDEELVAYYLKRKINGREIEL-EVIAEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVN 99 79**************************.99***********6434555777********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 s ++++vg+kktLv+y+grap+g +t+Wvmheyrl XP_023551229.1 100 S-ESRAVGMKKTLVYYRGRAPHGARTNWVMHEYRL 133 9.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 537 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKRKING REIELEVIAE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS ESRAVGMKKT LVYYRGRAPH 120 GARTNWVMHE YRLDDREIEV ACSGLQDAYA LCRVFKKNTI IAPKIEHNHP YCNITSSSNQ 180 FINSAQSSEL YSEGRCEEPE SSWSQFLSQE AFNSATLFPS YANIPYPPSK VDIALECARL 240 QHRFTLPPLE VEDFPHPGYS DHFKTSIPTN PTMLDGGSSE ASANQSWDGG IGNAYACSKE 300 DFTFMDSKDG FEDWNSIARF DVESFWEDPY SKCIDVGNVG DENLRWVGIS NKDLDKNCME 360 DSKLIPIHNI SNFQIEDHQN HLQDQPMNPD NYVVEGSGTS ANHLRSQSLE VVEEMKVNHG 420 LLMSTRQAAE TLFHQTMPSE TVKVQSLRCL VAPNLSSRHE RTAQKTGSRL LLSGSCLKKT 480 WSKLTRKMGS VVEVVLNEDE EHRSKKGEAL NMILKNTLIF FSIASLAVCS ICLAKLY

Sequence ? help Back to Top

Protein Sequence Length: 537 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKRKING REIELEVIAE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS ESRAVGMKKT LVYYRGRAPH  120
GARTNWVMHE YRLDDREIEV ACSGLQDAYA LCRVFKKNTI IAPKIEHNHP YCNITSSSNQ  180
FINSAQSSEL YSEGRCEEPE SSWSQFLSQE AFNSATLFPS YANIPYPPSK VDIALECARL  240
QHRFTLPPLE VEDFPHPGYS DHFKTSIPTN PTMLDGGSSE ASANQSWDGG IGNAYACSKE  300
DFTFMDSKDG FEDWNSIARF DVESFWEDPY SKCIDVGNVG DENLRWVGIS NKDLDKNCME  360
DSKLIPIHNI SNFQIEDHQN HLQDQPMNPD NYVVEGSGTS ANHLRSQSLE VVEEMKVNHG  420
LLMSTRQAAE TLFHQTMPSE TVKVQSLRCL VAPNLSSRHE RTAQKTGSRL LLSGSCLKKT  480
WSKLTRKMGS VVEVVLNEDE EHRSKKGEAL NMILKNTLIF FSIASLAVCS ICLAKLY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-135	NAC family protein