PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023551233.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 252aa    MW: 28195.1 Da    PI: 7.5018
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023551233.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.10.0012141162223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     kC++C+k F++   L +H + +
  XP_023551233.1 141 KCGKCTKLFRSYRALFSHEKIC 162
                     7*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MESHICKLCF KSLANGKAYA AHMKAHLTAT MAPPLPPPTP PETHGGVPSS FSSYSADDDE  60
FREDPKRIFN ILLQETESET ESTNPSRKRS KKYRKPPLEP SSSVSDTSPE EDLAMSLMML  120
SRDRWMKPET KSLKGIKRKK KCGKCTKLFR SYRALFSHEK ICQLETELDE EQEEHEELKN  180
GGTRRVFKCP FCFKLFGSGQ ALGGHKRSHV LSSENAAVSV NASVSLKLEI SLIDLNLPAP  240
IEEDDYSVVS DA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.12e-29C2H2 family protein