PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023551272.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family B3
Protein Properties Length: 273aa    MW: 30754.8 Da    PI: 6.3096
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023551272.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B365.21e-2082180196
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                     f+k+l++sdv++++r++lpkk ae+h   ++++e++ +t+ d++g  +W++k+++  +++s++yvl+ ++ +Fv+a+gL+ gDf++ +  ++ ++
  XP_023551272.1  82 FEKELKNSDVSSLRRMILPKKAAETHlpALDSKEGIIITMDDLDGlHVWSFKYRFwpNNNSRMYVLE-NTGDFVNAHGLQLGDFIMVY--QDyEN 173
                     99**************************7778899**********9*******9989999999***9.******************99..66677 PP

                     E..EEEE CS
              B3  90 felvvkv 96 
                      ++v+++
  XP_023551272.1 174 LNYVIQA 180
                     7777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MPFLDYQPPP PPPPPPPPPP PPPHDLAAAV PAFAASLHRK KRMPRHRRRS SSNLHFSFPS  60
SSAPLLPPPP RVIDPRRLKF LFEKELKNSD VSSLRRMILP KKAAETHLPA LDSKEGIIIT  120
MDDLDGLHVW SFKYRFWPNN NSRMYVLENT GDFVNAHGLQ LGDFIMVYQD YENLNYVIQA  180
KKASDQEMYT GIGTNVVING DIVFHDYDPN KVGNSIYVPS PTMDVSSFIY DTSSAFDNDS  240
TFDFMSGSVT NYSRMGGLEG FGSVENLSLD EFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.16e-83B3 family protein