PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023551421.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Trihelix

Protein Properties

Length: 442aa MW: 50753.5 Da PI: 6.7978

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023551421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	80.7	2e-25	120	217	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt+++v++Li+a+++++++++++ +kk++W+ +sk+m+erg+++sp+qC++k+++lnkryk+++++ +++ +++++++ +++d XP_023551421.1 120 KWTDKMVKLLITAVSYIGDDINSDFdgagrrkchiiQKKGKWKLISKVMAERGYQVSPQQCEDKFNDLNKRYKRLNDIIGRGtSCKVVENPALLD 214 7************999999975233455667999********************************************5699999988887 PP trihelix 84 qle 86 le XP_023551421.1 215 VLE 217 765 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MEGNLSQGGL IPGGTSYGGL DLQGPFKVHS QAQHSHALHQ QHHPHTRQGS AANPSIQEGF 60 SLSMGVVQNC DHAMSLVDYN KGERCKNSAS DEEPSFTEDG IDGHNETSKG KKGSVWHRVK 120 WTDKMVKLLI TAVSYIGDDI NSDFDGAGRR KCHIIQKKGK WKLISKVMAE RGYQVSPQQC 180 EDKFNDLNKR YKRLNDIIGR GTSCKVVENP ALLDVLEYLT DKEKDDVRKI LNSKQLFYEE 240 MCSYHNSNRL HLPHDPALQR SLQLAFRARD DHDNDEPRRH QNDDFDENEH DETDERDDFE 300 ENFAPHGDSR RSFGVLGGSV KRLRRDQDHD DTHACGKSLS SHAHAQAQFA QADTAHLETE 360 GMKGSTSQKQ WMELRLLQLE DQKLQIQVEM LELEKQKFKW ERFNKKKDRE LEKMRMVNER 420 MKLENERIAL DLKQKEIGSG FH

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MEGNLSQGGL IPGGTSYGGL DLQGPFKVHS QAQHSHALHQ QHHPHTRQGS AANPSIQEGF  60
SLSMGVVQNC DHAMSLVDYN KGERCKNSAS DEEPSFTEDG IDGHNETSKG KKGSVWHRVK  120
WTDKMVKLLI TAVSYIGDDI NSDFDGAGRR KCHIIQKKGK WKLISKVMAE RGYQVSPQQC  180
EDKFNDLNKR YKRLNDIIGR GTSCKVVENP ALLDVLEYLT DKEKDDVRKI LNSKQLFYEE  240
MCSYHNSNRL HLPHDPALQR SLQLAFRARD DHDNDEPRRH QNDDFDENEH DETDERDDFE  300
ENFAPHGDSR RSFGVLGGSV KRLRRDQDHD DTHACGKSLS SHAHAQAQFA QADTAHLETE  360
GMKGSTSQKQ WMELRLLQLE DQKLQIQVEM LELEKQKFKW ERFNKKKDRE LEKMRMVNER  420
MKLENERIAL DLKQKEIGSG FH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-158	Trihelix family protein