PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023551454.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 254aa    MW: 28690.3 Da    PI: 6.9878
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023551454.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.74.7e-09139186455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++iN+++  L++l+P +     k +  a +L   ++YI+sLq
  XP_023551454.1 139 SHSLAERVRREKINQRLRFLQDLVPGC----YKTMGMAVMLDVIINYIQSLQ 186
                     8*************************9....356999**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MKGHQWRLLP LQKQTLYKAC FCRAMGYNDL EMISNHFTVD SSNESDHYQG TIMSSANPFF  60
TDTFCFEKFD HFHETPSCVA PTAALCSSAP ANYSSFPAFN TEGSKSSGGR KRKSKNEGDE  120
EKPKGVIHVR AKRGQATDSH SLAERVRREK INQRLRFLQD LVPGCYKTMG MAVMLDVIIN  180
YIQSLQNQIE FLSMKLSVAS RYYDFNNSSE TDEIEIMQAT NGCGYMEEMG GRVVVREEEG  240
NGGSFYHHST LPPL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.13e-49bHLH family protein