PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023551467.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 231aa    MW: 24745.9 Da    PI: 4.4434
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023551467.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.31.6e-1759108155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+G+r ++ +g+Wv+eIr+p++   +kr++lg+f t+e+Aa+a++ a+++l+g
  XP_023551467.1  59 SLYRGIR-CR-SGKWVSEIREPRK---TKRIWLGTFPTPEMAAAAYDVAALALRG 108
                     579***9.55.6*********843...5*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MGDQKLPMNE LSPTPVDPLV PSVPTSQSPN PNTQAAAPQA LPQELPPPPP SSSSTKKHSL  60
YRGIRCRSGK WVSEIREPRK TKRIWLGTFP TPEMAAAAYD VAALALRGDD AVLNFPASIP  120
SYPIPASTSP IDIRTAASTA AAASAANTLK KVEGTRSNIE DTKIITVEDC SNTTLLKTEE  180
FVDEEEIFGM PSLLADMAEG MMVSPPRINS PPPSDDSIEN SDGTESLWSY L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.11e-37ERF family protein