PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023551525.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 149aa    MW: 16592.6 Da    PI: 5.7268
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023551525.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.18.4e-18547145
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                     ++ W++eEd +l++a+k  G++ W+ Iar+++ gRt++ +k++w+
   XP_023551525.1  5 KDTWSEEEDRILIEAHKDIGNK-WAEIARRLP-GRTENTIKNHWN 47
                     679*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MWVQKDTWSE EEDRILIEAH KDIGNKWAEI ARRLPGRTEN TIKNHWNATK RRQNSKKLKG  60
RDSDSNPNGS MLQNYIKSVT AGDRKISDSL PLLVDSHSPA AEEGGGFCFG FGYGSGSGSG  120
SGMECLNLMQ NEEMKSEMDL LELICQGNL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27785.16e-34MYB family protein