PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023551600.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 233aa    MW: 25528.8 Da    PI: 8.7189
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023551600.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.5e-19114164255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ tae+Aa a+++a+ +++g
  XP_023551600.1 114 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEDAALAYDRAAFRIRG 164
                     8********.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MNRSTKTEPD FGFLEPIRRH LLGEPEAAVV PGDRTGSFSS LIPCLEENWG DLPLKVDDSE  60
DMLLAAVLRE AVGSGWVPTL NLSSFGSFDF GVSAVQSELP ESFPPVVEPE RGKHYRGVRQ  120
RPWGKFAAEI RDPAKNGARV WLGTYETAED AALAYDRAAF RIRGSRALLN FPLRVNSGEP  180
EPVRVRSKRS SPELSLSPKR RKKVGSAAEG RGVQVDNQVA SLTRGGQLIV SQC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1198204PKRRKKV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.19e-68ERF family protein