PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023551611.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 398aa MW: 44760.2 Da PI: 5.9119

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023551611.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	91.3	1.6e-28	55	197	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy..... 82 lp+G++F+P+dee++ ++L++k++ + ++++ +++ +i++++P++Lp v ++ ++++fF+k++++yatg+rk+r+++sg XP_023551611.1 55 LPAGVKFDPSDEEIM-DHLAAKCTVGNlkphalIDEFIPtLETDqGICYTHPENLPG-VCKDGNDVHFFHKTSNAYATGQRKRRKIESGHdssle 147 799********99.999999998885555442222221222236******4.446789****************96655444444 PP NAM 83 ...WkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128 W++tgk+k++++ kg ++g kk++ +y+ k+ek++Wv+h+y+l XP_023551611.1 148 hfrWHKTGKTKALIE-KGVHKGWKKIFSLYRSskGGLKPEKSNWVIHQYHL 197 445*******9.9999******6511345778*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MARSWIIDSR TIARKVKNVT RSSSQVIKDC DAKRECPNCH FIIDNTDVSP EWPGLPAGVK 60 FDPSDEEIMD HLAAKCTVGN LKPHALIDEF IPTLETDQGI CYTHPENLPG VCKDGNDVHF 120 FHKTSNAYAT GQRKRRKIES GHDSSLEHFR WHKTGKTKAL IEKGVHKGWK KIFSLYRSSK 180 GGLKPEKSNW VIHQYHLGTE EDEKEGEYVL SKISHQQPKQ CIKSGDNMLI EDFDAMLRHT 240 SPRTPKSNPP VPPRSGKSFV SNAVADNSLP LSFAKGEELA LEMSRVSYPS ISSENNLGYH 300 AWLAGESQDI DNVELHYLED NLLCNEVLDS CAVMSNNQLN QMPFSLSGSN TCHEIMNDNV 360 PCGIADLENL ELDTPPDFHL SDLQFGSQES IFDWIDRI

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MARSWIIDSR TIARKVKNVT RSSSQVIKDC DAKRECPNCH FIIDNTDVSP EWPGLPAGVK  60
FDPSDEEIMD HLAAKCTVGN LKPHALIDEF IPTLETDQGI CYTHPENLPG VCKDGNDVHF  120
FHKTSNAYAT GQRKRRKIES GHDSSLEHFR WHKTGKTKAL IEKGVHKGWK KIFSLYRSSK  180
GGLKPEKSNW VIHQYHLGTE EDEKEGEYVL SKISHQQPKQ CIKSGDNMLI EDFDAMLRHT  240
SPRTPKSNPP VPPRSGKSFV SNAVADNSLP LSFAKGEELA LEMSRVSYPS ISSENNLGYH  300
AWLAGESQDI DNVELHYLED NLLCNEVLDS CAVMSNNQLN QMPFSLSGSN TCHEIMNDNV  360
PCGIADLENL ELDTPPDFHL SDLQFGSQES IFDWIDRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-92	NAC family protein