PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023551702.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 395aa MW: 44368.5 Da PI: 5.0225

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023551702.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	95.6	8e-30	57	199	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tk 79 lp+G++F+Ptdee++ ++L++k++ +l+l+ +i++ +i++++P++Lp v+++ ++++fF+k++++yatg+rk+r+ ++ XP_023551702.1 57 LPAGVKFDPTDEEIM-DHLAAKCAVGNLKLHAlidefipTIETDqGICYTHPENLP-GVSKDGNDIHFFHKTSNAYATGQRKRRKiesedsssME 149 799********99.99999995554444444433544447******.6677889****************85777666655 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+k+v++ kg ++g kk++ +y ++ +k+e+++Wv+h+y+l XP_023551702.1 150 HFRWHKTGKTKAVIE-KGVHKGWKKIFSLYrsSKGGSKPERSSWVIHQYHL 199 778********.9999******4423456777*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
MIMARAWILD SRTFARKVRN ISQSSSQVIK DCDAKRECPN CHFIIDNTDV SPEWPGLPAG 60 VKFDPTDEEI MDHLAAKCAV GNLKLHALID EFIPTIETDQ GICYTHPENL PGVSKDGNDI 120 HFFHKTSNAY ATGQRKRRKI ESEDSSSMEH FRWHKTGKTK AVIEKGVHKG WKKIFSLYRS 180 SKGGSKPERS SWVIHQYHLG VEEDEKEGEY VLSKISYQQP KQCSKSNDNM LIEDFDALVH 240 QTSPRTPKSN PPIPPRSGKS FVSNDVAENG LPQSFAKDEE LTPEAAHISL ENDVRFPGWL 300 AGESQGIDDA ELHYLEDNLL CNEVLDSNVL TSNSQLTQMS FPLSGSNGCH EIVNDNVTCG 360 IADLENLELD TPPDFHLADL QFGSQESIFD WLDRI

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

MIMARAWILD SRTFARKVRN ISQSSSQVIK DCDAKRECPN CHFIIDNTDV SPEWPGLPAG  60
VKFDPTDEEI MDHLAAKCAV GNLKLHALID EFIPTIETDQ GICYTHPENL PGVSKDGNDI  120
HFFHKTSNAY ATGQRKRRKI ESEDSSSMEH FRWHKTGKTK AVIEKGVHKG WKKIFSLYRS  180
SKGGSKPERS SWVIHQYHLG VEEDEKEGEY VLSKISYQQP KQCSKSNDNM LIEDFDALVH  240
QTSPRTPKSN PPIPPRSGKS FVSNDVAENG LPQSFAKDEE LTPEAAHISL ENDVRFPGWL  300
AGESQGIDDA ELHYLEDNLL CNEVLDSNVL TSNSQLTQMS FPLSGSNGCH EIVNDNVTCG  360
IADLENLELD TPPDFHLADL QFGSQESIFD WLDRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01600.1	2e-90	NAC family protein