PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023551731.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 223aa    MW: 23033.4 Da    PI: 7.7046
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023551731.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.000247193123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C++C + F ++  L  H++ H
  XP_023551731.1 71 YECQYCYREFANSQALGGHQNAH 93
                    99******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MAALDHFQTK PNNNNPTTRL KLFGFDVQED FEDDSGRTPS GSSDSGGGGV GGGGGGGGGG  60
GAAAASGERK YECQYCYREF ANSQALGGHQ NAHKKERQQL KRAQLQASRN AAVLRNPIVS  120
AFSPPLHLLP SPAATSSASW VYMPRAPPQF QVSHGSVFTP AYVEAPPQPP PPSAAAFFSI  180
GSRSAHGMVD GPSLSRFSKA EGGSGFDDGP GLDLHLSLAP AAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06650.14e-13C2H2 family protein