PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023551737.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 197aa    MW: 22341.2 Da    PI: 6.7246
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023551737.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.00046789123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C+ C+++F ++  L  H++ H
  XP_023551737.1 67 FSCNFCKRVFYSSQALGGHQNAH 89
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MIFQGEQIES LKEKKGEDES VEEEEEEEEA TDQPEGVGAL EWLNLSLGRN KQLLTESQSS  60
AGSAKTFSCN FCKRVFYSSQ ALGGHQNAHK RERSAARRHQ AQRMMTLLGL PIHNSMVRSL  120
GVQPHSLVHK TSREDTAIVA RFNHVKSGSW APFMLGDAMD LRWPGSFRFT QHQVLPESPP  180
LREPQMEPFK LDLNLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.12e-23C2H2 family protein