PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552101.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 232aa    MW: 24407.7 Da    PI: 5.6408
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552101.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.82.1e-06129150223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     kC  C+k+F+++  L  H+r+H
  XP_023552101.1 129 KCATCNKVFKSWKALFGHLRSH 150
                     7********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MEKNTNANAN ANINVDADIN TVPESTSPDQ RHGRETSPMA VSPPPASIDD NSPTPPVINL  60
SSVAPAPERA TTGDVGTSSS SSTHGHVGGG SNKEVGKKRG RGDGGEQQQQ VKAAKKKGEL  120
TEVPKGDPKC ATCNKVFKSW KALFGHLRSH PERTYRGALP PPTAAELDIR HCQQQFASTL  180
LTVAQGVAAS RRGLDIDLNQ PSAAEESESP EKSGGVGFDL NVEQPPESDN DE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196102GKKRGRG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35700.12e-14C2H2 family protein