PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023552111.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 409aa MW: 45809.1 Da PI: 7.7869

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023552111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.2	1.7e-49	43	168	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + +++ XP_023552111.1 43 MPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTED 136 79*************************.89***********8778899************************************* PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +glkktLvfy+g+apkg +t+W+m+eyrl XP_023552111.1 137 LRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 168 ****************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MAIAAAASSS SSSTMSHEGS STKNNNNNSN STEHDQHEHD IVMPGFRFHP TEEELVEFYL 60 RRKVEGKRFN VELITFLDLY RYDPWELPAL AAIGEKEWFF YVPRDRKYRN GDRPNRVTTS 120 GYWKATGADR MIRTEDLRSI GLKKTLVFYS GKAPKGIRTS WIMNEYRLPH HETERYQKAE 180 ISLCRVYKRA GVEDHHPSLP RSLASRASSS SSRMKTSATS KNLLPNGSVY VIPTSSPTNF 240 ELQFHNRQLQ IGTGVETTTV VAAAADASAT SSCEEVTTVL GLSKQNPFPT TPLIDMAAGS 300 STPPNSLEQN DHQSNIIQKQ QQPSSSYPSF FTPSSNNSLD DLQNLINYQQ QPPLSTSPAA 360 IVNSLPPPQY YQPTPLPPPQ QLALNTLPVA FSDRLWEWNP IQDATNPFK

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MAIAAAASSS SSSTMSHEGS STKNNNNNSN STEHDQHEHD IVMPGFRFHP TEEELVEFYL  60
RRKVEGKRFN VELITFLDLY RYDPWELPAL AAIGEKEWFF YVPRDRKYRN GDRPNRVTTS  120
GYWKATGADR MIRTEDLRSI GLKKTLVFYS GKAPKGIRTS WIMNEYRLPH HETERYQKAE  180
ISLCRVYKRA GVEDHHPSLP RSLASRASSS SSRMKTSATS KNLLPNGSVY VIPTSSPTNF  240
ELQFHNRQLQ IGTGVETTTV VAAAADASAT SSCEEVTTVL GLSKQNPFPT TPLIDMAAGS  300
STPPNSLEQN DHQSNIIQKQ QQPSSSYPSF FTPSSNNSLD DLQNLINYQQ QPPLSTSPAA  360
IVNSLPPPQY YQPTPLPPPQ QLALNTLPVA FSDRLWEWNP IQDATNPFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02450.1	1e-106	NAC family protein