PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023552141.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB

Protein Properties

Length: 151aa MW: 17585.1 Da PI: 10.6166

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023552141.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.4	2.2e-15	11	56	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqk 46 +g+WT+eEde+lv++v+++G+++W++ r g + Rt+k+c++rw + XP_023552141.1 11 KGPWTAEEDEILVNYVNKFGPRDWSS-LRSKGlLPRTGKSCRLRWVN 56 79**********************.66667788********87 PP
2	Myb_DNA-binding	43.5	7.1e-14	67	108	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++eE+ +++ +q+G++ W++Ia ++ gRt++++k++w + XP_023552141.1 67 KFSAEEERVVIELQAQFGNK-WAKIATYLE-GRTDNDVKNFWST 108 79****************.*****.*********65 PP

Sequence ? help Back to Top
Protein Sequence Length: 151 aa Download sequence
MERQNGVNMK KGPWTAEEDE ILVNYVNKFG PRDWSSLRSK GLLPRTGKSC RLRWVNRLQP 60 NLKTGCKFSA EEERVVIELQ AQFGNKWAKI ATYLEGRTDN DVKNFWSTRR KRLERILQIP 120 PQKSQKNKQR SLEPQGLYEL PALEVTVSHS S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	1e-64	MYB family protein