PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552288.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 260aa    MW: 29411.4 Da    PI: 9.3264
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552288.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding409.4e-133074147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+ E++++++a++++  + Wk+I + +g  +t  q++s+ qky
   XP_023552288.1 30 RESWTEPEHDKFLEAIQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 74
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MALPFDTAAT SLRDDLLKRA RKPYTITKCR ESWTEPEHDK FLEAIQLFDR DWKKIEAFVG  60
SKTVIQIRSH AQKYFLKVEK SGTGEHLPPP RPKRKAARPY PQKTSTNALA LVSGPFQSSS  120
LEPNYIIKPD SSSAPASFMA DNSTQMVNFS QSARGQVIEN NCCSSTDRTT RARFPTKSSV  180
EEHNKLPLRV LPDFGQVYNF IGSVFDPKAS DHLQKLKQMD QIDVETVMLL MRNLAINLTG  240
PDFEDHKKVL SSYDAFMEHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.12e-95MYB_related family protein