PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552553.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YB
Protein Properties Length: 232aa    MW: 25515.2 Da    PI: 8.1361
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552553.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB176.33.1e-5531126297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eqdrflPianvsrimkk lP nakisk+aketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv +lk+yl+kyre+e+e
  XP_023552553.1  31 KEQDRFLPIANVSRIMKKSLPPNAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVTTLKTYLNKYRETEEE 125
                     89*******************************************************************************************98 PP

           NF-YB  97 k 97 
                     k
  XP_023552553.1 126 K 126
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MNGHKRNPTT ATNSSPVGSP TSGNISDSST KEQDRFLPIA NVSRIMKKSL PPNAKISKEA  60
KETVQECVSE FISFITGEAS DKCQREKRKT INGDDLLWAM TTLGFENYVT TLKTYLNKYR  120
ETEEEKHSLA RQDDHSPSPA KSTAAVCPAE PIIGGKSANS VMDFQNLNSG FYSLGAHNHN  180
HNHHQGNQKS YHIIDGVGFG ENLRGFNLSA VHENEGNRGR AMAAHLQQSS GW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.18e-62NF-YB family protein