PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552644.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 309aa    MW: 33970.3 Da    PI: 9.2039
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552644.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.4e-19112162256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p +   r r++lg+++tae Aa a+++a+ kl+ge
  XP_023552644.1 112 LYRGVRQRH-WGKWVAEIRLPQN---RMRVWLGTYDTAEAAAYAYDRAAYKLRGE 162
                     59******9.**********954...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MDNKMRQEQS NSMNLTDIRT LLSNLLLSRQ STNTLDSIFS YCLPSAAAAA APVLEPALGS  60
SVYLRQRDLV HQFCVENHHG CSSPNLQHQQ RDHPVGISVG YGGFPGAVKK KLYRGVRQRH  120
WGKWVAEIRL PQNRMRVWLG TYDTAEAAAY AYDRAAYKLR GEYARLNFPN LKDFRNLGFA  180
DCSRLNALKH SVDAKIQAIC LKMKRERGKT SSKKSNPKNG AVSASSSMSS PSPSPSPVSA  240
EWCWRGEMVC SSAVSEEDGF WRSENSPPVS SSSSGSAVAV AGEGVCEGYS SLAKMPSFDP  300
DLIWEVLAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G64380.16e-57ERF family protein