PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552792.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 326aa    MW: 37010.1 Da    PI: 4.5669
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552792.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.2e-19104154155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +l+g
  XP_023552792.1 104 KKFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIQLRG 154
                     59********.**********82....35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MEDTLFCPVK LTEHRNFTSK FSLKKYHQSE SRVVRISVTD PDATDSSSDE EELFERQRVK  60
KYINEIKIQS GCRNSLLPSC RKRSAGEQSD SRRSGKVVPA TNGKKFRGVR QRPWGKWAAE  120
IRDPARRVRL WLGTYDTAEE AAMVYDNAAI QLRGPDALTN FATPSPVPMP EKEVEVANIA  180
SGSGSYYDSS EESHNLSSPT SVLHFRTPSP EETEKPQKPD ESQQPPPPFA DDQFHECQVK  240
TTISSEYYTE FPRFDDVFKL PIPESPIFVD EQPLFFEESI WNEDFSEFFT NLPEDFGTPL  300
LSSPISQGGD DYFQDILMGS DPLVVL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-57ERF family protein