PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552805.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 343aa    MW: 38503.3 Da    PI: 4.6887
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552805.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.2e-19194244255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp   + +  r++lg+f ta eAa+a+++a+ kl+g
  XP_023552805.1 194 HYRGVRQRP-WGKFAAEIRDP---NrRGSRVWLGTFETAIEAARAYDRAAFKLRG 244
                     6********.**********9...4334*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MELVNLEEAA ALENIKLHLL GELSPLPRNL ASDDSLCVTS SDRSVCSDAS TTSNCPLTIT  60
DYFDSDDFFE FSSDFIREES SILSNDDFFG VEMKPNVIDL TTPKSEEFLE FEAKPNVFED  120
LSLSSSSLYS NSSSEVESKT KLIGRVTNSN RKRSNLKISL PNKTTQWINF DAAEKKNPVV  180
VHRSKDLEAE KKVHYRGVRQ RPWGKFAAEI RDPNRRGSRV WLGTFETAIE AARAYDRAAF  240
KLRGSKAILN FPLEAANSYY SEPLVAGKRR REEEVEEVVE AVPVKKEKTE EMNLPAADVS  300
FIEDMPLTPS SWSMVWDGES KGLLNIPPLS PLSPFGFPQL MVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47230.14e-38ERF family protein