PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552832.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 195aa    MW: 22005.3 Da    PI: 6.3953
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552832.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.28.1e-102476155
                    CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55
                    r+  h  +Er  R+++ s +++L +llP  +     ++ + a+i+ +Av+YI +L+
  XP_023552832.1 24 RKIVHRDIEREPRKQMVSLLSNLPSLLPLqL---VEGRRTRADIVDEAVNYIEHLR 76
                    5678*************************77...9*******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MAAGCEGSSE LNANKIESTH NEVRKIVHRD IEREPRKQMV SLLSNLPSLL PLQLVEGRRT  60
RADIVDEAVN YIEHLRGKIS ELHVKRDAVK RDAIKGLHLA DESSDLCPSS CIVIKPYSCG  120
LEIVISIFRE QNLELSEVMK VLLEESIEIT SCASTKVKER MLHTIQTKVD DPTRIDVHEL  180
QQKLYQVCTF VSFGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.13e-23bHLH family protein