PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552853.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 211aa    MW: 23382.1 Da    PI: 5.4416
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552853.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.91.9e-2190138355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr+++ +g+WvAeIr p     +  +r++lg+f taeeAa+a+++a+++++g
  XP_023552853.1  90 YRGVRQRP-WGKWVAEIRNP-----KlaTRVWLGTFNTAEEAARAYDKAALEFRG 138
                     9*******.**********9.....557*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MADRFWRELQ IPLPTFDCAA SASASDFFSA SATTSSISCS STDAIFSPSV FETCSVCRID  60
GCLGCDFFPP SSSPVEGETK SGKKRLKKIY RGVRQRPWGK WVAEIRNPKL ATRVWLGTFN  120
TAEEAARAYD KAALEFRGPR AKLNFPFTDD SLRTMRPENE ISKNGRNSAA NGIENEDEIW  180
RKIEKDEMDQ WISSLITDHG GDSSDSTSIG A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-27ERF family protein