PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552881.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ZF-HD
Protein Properties Length: 178aa    MW: 20131.6 Da    PI: 8.8674
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552881.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer97.11.4e-303690358
     ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                     vrY+eCl+N A++ Ggh++DGCgEfmps ge+gta+++kCaAC+CHR+FHRr ve
  XP_023552881.1 36 PVRYRECLRNYAVKSGGHVLDGCGEFMPS-GEDGTADGFKCAACECHRSFHRRVVE 90
                    589*************************9.999********************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MELRDHQTAH YSLRPRRDHP PPNPDPAAPP PAPSSPVRYR ECLRNYAVKS GGHVLDGCGE  60
FMPSGEDGTA DGFKCAACEC HRSFHRRVVE VVDNGRIKVV SYGMFNYYYY YYYYYILRSN  120
NEKENYRRSF AGPVMMAFGG SAEGPAESSS DGGEASGKAK KRVRTQFIVE EKGKMMRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.16e-25ZF-HD family protein