PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552990.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 226aa    MW: 24887.1 Da    PI: 9.3434
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552990.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11.1e-18100150255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g++++eIrdp + g  +r++lg++ tae+Aa a+++a+ +++g
  XP_023552990.1 100 RYRGVRRRP-WGKYASEIRDPAKSG--ARVWLGTYETAEDAALAYDRAAFRMRG 150
                     8********.**********96654..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MELQRPDPFG DPNLVHNKTP LTYADLFSSL TDQWGDLPLK LDDSHDMVIF NSLHDAVVFV  60
LSPLHSIHPP DASSASSALH LDPFPTTTAP AAQMGDKSKR YRGVRRRPWG KYASEIRDPA  120
KSGARVWLGT YETAEDAALA YDRAAFRMRG SKALLNFPNR IGSDDPPPLR VSARRREHDI  180
LVPLADESAK RRKGAANKKA EPESSKFQVG PSQIAALPVG EQLLVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174193RRREHDILVPLADESAKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.17e-41ERF family protein