PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023553093.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 320aa    MW: 35280.4 Da    PI: 5.4968
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023553093.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83e-19107157155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +g+W+AeIrdp     r  r++lg++ taeeAa  +++a+ +l+g
  XP_023553093.1 107 KKFRGVRQRP-WGKWAAEIRDPL----RrVRVWLGTYNTAEEAAMVYDNAAIQLRG 157
                     59********.**********72....45*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MEPMDLFSSP VLPPIKYTEH RSQTRLVSPP LMTPKVVKIS VMDADATDSS SDDEEQDYAC  60
RRVKKFVNEI TIEASPVKSS RKKPTGGKSK FPAVNRDPLK QQPTGGKKFR GVRQRPWGKW  120
AAEIRDPLRR VRVWLGTYNT AEEAAMVYDN AAIQLRGPTA QTNFIPPPKF SPETAAASSG  180
YVSAEESNEN LSSPTSVLRC PSPSTNDAVS GKTSTTTTTG KETGRDEPEK ISEFSFHSNY  240
DTFFPNDIFD FRPPVPSLFG ETTLNDGFLK GDYGSSMFIN PADDFGFGFG FGFGLSTWHT  300
VKDSFQDISD IFGSDPLLAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.17e-57ERF family protein