PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553114.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

SRS

Protein Properties

Length: 249aa MW: 26571.6 Da PI: 6.7628

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553114.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	102.3	8.3e-32	72	137	4	69
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaae 69 + +sCqdCGnqakkdC+h+RCRtCCksrgf C+thvkstWvpa+krrer +++ sk+ +++++ XP_023553114.1 72 KVISCQDCGNQAKKDCVHMRCRTCCKSRGFLCETHVKSTWVPASKRRERLIRTTGGDSKRPRDTHA 137 5589*********************************************98888877777666655 PP
2	DUF702	81.8	1.8e-25	136	199	94	155
DUF702 94 aeskkeletsslPeevsseavfrcvrvssvdd..geeelaYqtavsigGhvfkGiLydqGleek 155 + +++ +e+ ++P+ev+s+avfrcvr++++d+ g +++aYqtav+igGh+fkGiLyd+G++++ XP_023553114.1 136 HAASSGFEIGNFPPEVNSTAVFRCVRMTTLDEptGTDQYAYQTAVNIGGHIFKGILYDHGPDQQ 199 44566788999*******************9899***********************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MAGFFPLGGG GGGSSGGEII HPTDGLLWYK NYESFETEQQ QQGGEGFVYS GENSPARSSL 60 VMVRSGGEGG GKVISCQDCG NQAKKDCVHM RCRTCCKSRG FLCETHVKST WVPASKRRER 120 LIRTTGGDSK RPRDTHAASS GFEIGNFPPE VNSTAVFRCV RMTTLDEPTG TDQYAYQTAV 180 NIGGHIFKGI LYDHGPDQQQ PPISASPDGG ALLITTAESA ALLDPPPSYP APLTSYIPAG 240 TQFFQPPTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75520.1	4e-60	SRS family protein