PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553163.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 349aa MW: 39095.5 Da PI: 8.3851

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553163.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.8	4.2e-53	15	143	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv+yLkkk+++ +l++ +i+evd+yk++Pw+Lp+k++ +e+ewyfFs+r++ky++g r+nra++sgyWkatg+dk+vl++ XP_023553163.1 15 LPPGFRFHPTDEELVVHYLKKKANSVPLPV-AIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRERKYPKGARPNRAATSGYWKATGTDKPVLAS 108 79**************************.88***********988899************************************9 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kk Lvfy g+ pkg kt+W+mheyrl XP_023553163.1 109 ggSNQKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 143 877788*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MESTDSSAGP QQPNLPPGFR FHPTDEELVV HYLKKKANSV PLPVAIIAEV DLYKFDPWEL 60 PAKATFGEQE WYFFSPRERK YPKGARPNRA ATSGYWKATG TDKPVLASGG SNQKVGVKKA 120 LVFYGGKPPK GIKTNWIMHE YRLADNKPSI NKPPGYDLAN KKNSLKLDDW VLCRIYKKNN 180 SHRGMDQERE DSMDDIMIGS IPQSLRLNDE YPKLGINYAT FLHQNDQNLL QGIVGANNND 240 GGLTNSKRLP SSLFWTQQQE QDQQDQDHSD ISSNKRLHFE NTTDGASTSV TTTHSTDNNP 300 QNSTSSFATL LNNLPQTPPL HHHAHTILGS IGDGLFRSTY QVPGANWYS

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MESTDSSAGP QQPNLPPGFR FHPTDEELVV HYLKKKANSV PLPVAIIAEV DLYKFDPWEL  60
PAKATFGEQE WYFFSPRERK YPKGARPNRA ATSGYWKATG TDKPVLASGG SNQKVGVKKA  120
LVFYGGKPPK GIKTNWIMHE YRLADNKPSI NKPPGYDLAN KKNSLKLDDW VLCRIYKKNN  180
SHRGMDQERE DSMDDIMIGS IPQSLRLNDE YPKLGINYAT FLHQNDQNLL QGIVGANNND  240
GGLTNSKRLP SSLFWTQQQE QDQQDQDHSD ISSNKRLHFE NTTDGASTSV TTTHSTDNNP  300
QNSTSSFATL LNNLPQTPPL HHHAHTILGS IGDGLFRSTY QVPGANWYS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15510.1	1e-108	NAC family protein