PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023553185.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 321aa    MW: 35440.4 Da    PI: 4.9889
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023553185.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.15e-112422821055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L++l+P+      +K++ +++Le+AveY+k Lq
  XP_023553185.1 242 RKRRERINERLRMLQSLVPNG-----TKVDISTMLEEAVEYVKFLQ 282
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MEPIGPISER EWISLTGAYT AEESDFMANL LNNYCLPNEL NPGSSSAVPS ACLAMAPMDE  60
PSYYSNPYYT LNENDSHPLW LPNNGASLSL DFSMEDVRNG DRLDDCGSSR KTRQCRLQQF  120
PAGSSQPEKR AEITVEVATK DDKVAPTPVD TNSRKRSPSS YNVEKTKTST RNTRARKSSK  180
IGSASCNEEE DHIVSPNGLC TSSFSSEDDC NGGITSSSTL SSSGKPRASR GSATDPQSLY  240
ARKRRERINE RLRMLQSLVP NGTKVDISTM LEEAVEYVKF LQLQIKLLSS DDLWMYAPIA  300
YNGMDIGLNL KLMKQDNNAS Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.11e-46bHLH family protein