PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023553237.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 168aa    MW: 18337.5 Da    PI: 6.7865
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023553237.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.13.4e-161259355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ykGVr ++ +g+Wv+eIr+p++   ++r++lg++ t e+Aa+a++ a+++l+g
  XP_023553237.1 12 YKGVR-CR-SGKWVSEIREPRK---TTRIWLGTYPTSEMAAAAYDVAALALKG 59
                    9***9.55.6*********843...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MASTSSNRHG NYKGVRCRSG KWVSEIREPR KTTRIWLGTY PTSEMAAAAY DVAALALKGS  60
NAVLNFPDSI RSYPIPASKS PADIRLAAAA AAATKKVDQG ESNNPICHQS TPSHEFVDEE  120
ALFGMPNLLH DMAEGMLLPP PPRMSDSPSS HDCYSWNSTG DENLWSYH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.19e-40ERF family protein