PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553376.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NF-YB

Protein Properties

Length: 279aa MW: 30295.9 Da PI: 8.5722

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553376.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	167.8	1.3e-52	123	219	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqd+++Pianv+rim+++lP++akis+daket+qecvse+isf+t+ea+++cqre+rkt++++d+lwa+++lGf+dy+epl+++l++yre e+ XP_023553376.1 123 VREQDQYMPIANVIRIMRRILPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTVTAEDVLWAMGKLGFDDYIEPLTMFLNRYRESES 217 69*******************************************************************************************99 PP NF-YB 96 ek 97 ++ XP_023553376.1 218 DR 219 86 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MQPAKMEYKA NGTSVFSINL SAACFPSKRH FFHSPSALLT SRERKARRAI MECGGSSAAA 60 AGGGGGGGGG GDGFHSYRRQ HSKPTSGLNH HLTNGATATG NSPATCHVPV TGANNEQSQQ 120 CMVREQDQYM PIANVIRIMR RILPSHAKIS DDAKETIQEC VSEYISFITG EANERCQREQ 180 RKTVTAEDVL WAMGKLGFDD YIEPLTMFLN RYRESESDRV RTEPILRRNV DYVPQVGMMP 240 PYGQAFPLGH TSTGMFDAMG GYYGGGRSGG TSSGNGNQL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21970.1	3e-65	NF-YB family protein