PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023553385.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 224aa    MW: 24382.3 Da    PI: 8.0021
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023553385.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.3e-202574255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a+++a+  l+g
  XP_023553385.1 25 RYRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDNAAITLRG 74
                    7********.**********883....5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MRRGRGAATA TAAAREAAPP GSERRYRGVR KRPWGRFAAE IRDPWKKTRV WLGTFDSAED  60
AARAYDNAAI TLRGPKAKTN FPLANPISFF DYPPYPHPHP HPHPLNAPDP FLDPRFQINN  120
PHRPTSSSLS STVESFSGPH PPSAAAPTTT TASPSRRYPR TPPLLPEDCH SDCDSSSSVI  180
DDGDDIASSS MIPRKPPLPF DLNIPPSELL DLAADDLGCT ALCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.13e-22ERF family protein