PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553736.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB

Protein Properties

Length: 225aa MW: 25598.9 Da PI: 8.4851

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553736.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.6	2.2e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqkyl 48 +g+WT++Ed++l+++++++G g+W++ ++ + R++k+c++rw +yl XP_023553736.1 14 KGPWTPQEDQILINYITLYGHGNWRALPKQSAgLLRCGKSCRLRWINYL 62 79*********************************************97 PP
2	Myb_DNA-binding	51	3.3e-16	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE+e ++++++ lG++ W++Ia++++ gRt++++k+ w+++l XP_023553736.1 68 RGNLTKEEEETIIKLHRVLGNR-WSAIAARLP-GRTDNEIKNVWNTHL 113 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 225 aa Download sequence
MVRAPCCEKM GLKKGPWTPQ EDQILINYIT LYGHGNWRAL PKQSAGLLRC GKSCRLRWIN 60 YLRPDIKRGN LTKEEEETII KLHRVLGNRW SAIAARLPGR TDNEIKNVWN THLKKRQNYT 120 AMNRRICGGD EEPATQPFKF TTFHSMQNPA STSSPPHCSR ESSSIVLPEN GDLSTNNLPE 180 ADENFWVEVL AGDQIATVES QQGFGGESQG QFDSMNFWYN ICSRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	1e-71	MYB family protein