PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553737.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB

Protein Properties

Length: 224aa MW: 25527.9 Da PI: 8.4851

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553737.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.7	1.1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l+++++++G g+W++ ++ g+ R++k+c++rw +yl XP_023553737.1 14 KGPWTPQEDQILINYITLYGHGNWRALPKQSGLLRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	51	3.3e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T+eE+e ++++++ lG++ W++Ia++++ gRt++++k+ w+++l XP_023553737.1 67 RGNLTKEEEETIIKLHRVLGNR-WSAIAARLP-GRTDNEIKNVWNTHL 112 7999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MVRAPCCEKM GLKKGPWTPQ EDQILINYIT LYGHGNWRAL PKQSGLLRCG KSCRLRWINY 60 LRPDIKRGNL TKEEEETIIK LHRVLGNRWS AIAARLPGRT DNEIKNVWNT HLKKRQNYTA 120 MNRRICGGDE EPATQPFKFT TFHSMQNPAS TSSPPHCSRE SSSIVLPENG DLSTNNLPEA 180 DENFWVEVLA GDQIATVESQ QGFGGESQGQ FDSMNFWYNI CSRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	8e-73	MYB family protein