PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023553875.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family B3
Protein Properties Length: 308aa    MW: 34781.9 Da    PI: 9.5256
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023553875.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.64.1e-17125214198
                     EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     f+k +++s+v+   +l lp +f+++h      e+ +ltl de+ ++++ k+  +k++    l++GW++F  +++L +gD++vF+l++ +ef  +v
  XP_023553875.1 125 FVKPMLQSHVTGGFWLGLPVHFCKAHlP---LEDEMLTLVDEDENEFQTKYLAEKTG----LSGGWRGFSIDHQLVDGDTLVFQLTKPTEF--KV 210
                     89************************53...34558***************555555....***********************9876666..88 PP

                     EEE- CS
              B3  95 kvfr 98 
                      ++r
  XP_023553875.1 211 YIIR 214
                     8887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MVESNLTYEE CRRQRLEENK KRMEELNLNK LADALKSSSP KSSPLKRPRQ PLDISSLSVR  60
RSSRFADKPP PSYKEEPIEP LAGLRRTYQR RDLLNRVYAS DVERQYAIDR ARDLQSSLES  120
RYPSFVKPML QSHVTGGFWL GLPVHFCKAH LPLEDEMLTL VDEDENEFQT KYLAEKTGLS  180
GGWRGFSIDH QLVDGDTLVF QLTKPTEFKV YIIRAYNLED KENTHGDSDV TQLERNGKGN  240
TGSGKGDHGE DSNVSLLEKS GKKVTRSSGR KTRANKSEDK AANGEDSGVS QLETSGKRTT  300
RSASKGKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.17e-86B3 family protein