PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023553893.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

DBB

Protein Properties

Length: 235aa MW: 25937.2 Da PI: 6.9426

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023553893.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	26.6	1.3e-08	3	43	4	38
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +C+ +++ e++ fC ++ lC+ C l+ H+ H+ XP_023553893.1 3 IRCDVCDQAEASVFCYADEAALCHGCDLHVHRAnklagkHS 43 58*****************************7666666665 PP
2	zf-B_box	28.5	3.1e-09	55	92	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Ht 38 ++C+ ++e ++ fC++++ +C++C ++H+ Ht XP_023553893.1 55 SPRCDICQERRALVFCQQDRAIICRECDISIHETneHT 92 689*****************************767775 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MKIRCDVCDQ AEASVFCYAD EAALCHGCDL HVHRANKLAG KHSRFSLIQP IKKDSPRCDI 60 CQERRALVFC QQDRAIICRE CDISIHETNE HTQKHSRFLL TGVKLSSTCF SSQTSSSSHG 120 CDAAMDVKTG SSHACSKKPK IAVKAISSHS AEKAAPSTSN YKVEDGQASD GGSFSTSSIS 180 EYLETLPEWC LEEFLDPSAV ANHFCKLNAI CESESGEPAR IVRHNQTWQH LEICR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G39070.1	5e-57	DBB family protein